SERVEIS

recerTIC UPC - Study of UPC science communication in BIOINFORMATICS (2007-2017)

Publicacions Autors i coautors Institucions Matèries Revistes
Congressos Citacions Autors Més citats Matèries de citacions

 

This study is part of recerTIC UPC, a set of studies prepared by the Rector Gabriel Ferraté Library (BRGF) that aim to offer a representative view of the UPC’s scientific output on emerging topics in the field of ICT. In the recerTIC UPC study in bioinformatics, we have considered all of the journal articles and conference publications indexed in the Web of Science (WoS) database between 2007 and 2017 and authored by UPC researchers. The query date was June 5, 2018.

More information about the methodology used for recerTIC UPC can be found clicking on this link.

The data on which this study is based are freely accessible and can be downloaded clicking on this link.recerTIC UPC

Notice: WoS allows a very extensive extraction of authors and subjects related to bioinformatics. Unfortunately, an exhaustive recovery is not possible. Any possible absence of authors and topics at recerTIC UPC would be caused by this limitation.

UPC scientific output for 2007–2017 and its time distribution

 

# WoS UPC records
Conference papers Journal articles Others Total
63 385 11 459

 

 

Interactive map of the output of UPC authors and their co-authorships

  • Due to its complexity, this map takes some time to load. Please be patient.
  • Each node is dedicated to an author who has published on the subject examined in this survey. The edges indicate the number of documents co-authored by the authors referred to. Blue indicates a UPC author, orange an author from a research entity associated with the UPC and grey an author who is not linked to the UPC. In the case of authors with more than one affiliation, the system chooses the color of the institution that appears more times associated with the author. In the case of an author having the same number of publications associated with two or more institutions, the system chooses the color of the institution that comes first in alphabetical order.
  • This map includes researchers that have authored at least 2 publications. UPC staff may request customised maps with nodes that have a value other than 2 from the Rector Gabriel Ferraté Library.
  • Due to the fact that the documents with more than 50 authors make it impossible to create the next interactive map, these articles have been deleted to draw the graph.
  • Once the map has opened, refer to the instructions for use to make the most of the possibilities it offers.

 

Institutions with the highest number of co-authorships with UPC researchers

 

Interactive map of the WoS subject categories assigned to the output of UPC authors

  • Each node indicates the number of journal articles and conference papers indexed under the specified subject category. The edges indicate the number of documents related to the linked topics.
  • Once the map has opened, refer to the instructions for use to make the most of the possibilities it offers.

 

 

List of the 15 journals with the most publications by UPC authors

 

Journal title # docs h5 index
PLOS ONE 24 180
BIOINFORMATICS 8 110
PHYSICAL CHEMISTRY CHEMICAL PHYSICS 8 108
RSC ADVANCES 5 96
CHEMOSPHERE 4 80
JOURNAL OF CHEMICAL PHYSICS 4 75
SOFT MATTER 7 73
BIOMACROMOLECULES 6 71
JOURNAL OF PHYSICAL CHEMISTRY B 19 63
BMC BIOINFORMATICS 13 61
JOURNAL OF CHEMICAL INFORMATION AND MODELING 5 51
JOURNAL OF COMPUTATIONAL CHEMISTRY 6 48
JOURNAL OF BIOMOLECULAR STRUCTURE DYNAMICS 4 33
IEEE ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 4 32
BIOPOLYMERS 5 31
Note: The source of information used for the h5 index is Google Scholar

 

List of the 15 conferences with the most publications by UPC authors

 

Conference name # docs h5 index
ANNUAL IEEE GLOBAL TELECOMMUNICATIONS CONFERENCE GLOBECOM 2 51
ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY EMBC 8 31
INTERNATIONAL EURO PAR CONFERENCE ON PARALLEL PROCESSING 2 22
COMP IN CARDIOL CONFERENCE CINC 1 17
ACM INTERNATIONAL CONFERENCE ON COMPUTING FRONTIERS CF 2 16
INTERNATIONAL CONFERENCE ON COMPLEX INTELLIGENT AND SOFTWARE INTENSIVE SYSTEMS CICIS 2 16
IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOENGINEERING 2 15
INTERNATIONAL WORKSHOP ON ALGORITHMS IN BIOINFORMATICS WABI 2 13
INTERNATIONAL WORK CONFERENCE ON BIOINFORMATICS AND BIOMEDICAL ENGINEERING IWBBIO 5 10
INTERNATIONAL SYMPOSIUM ON BIOINFORMATICS RESEARCH AND APPLICATIONS 2 --
INTERNATIONAL WORKSHOP ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY AND BIOINFORMATICS IWPACBB 2 --
ANNUAL MEETING OF THE UNITED STATES AND CANADIAN ACADEMY OF PATHOLOGY 1 --
CONFERENCE ON CLINICAL AND BIOMEDICAL SPECTROSCOPY AND IMAGING HELD AT THE EUROPEAN CONFERENCES ON BIOMEDICAL OPTICS 1 --
CONFERENCE ON PROCESS INTEGRATION MODELLING AND OPTIMISATION FOR ENERGY SAVING AND POLLUTION REDUCTION 1 --
CONGRESS OF THE SOCIEDAD ESPANOLA DE ENFERMEDADES INFECCIOSAS Y MICROBIOLOGIA CLINICA 1 --
Note: The source of information used for the h5 index is Google Scholar

 

Citations of UPC scientific output for 2007–2017 and their time distribution

 

Total UPC documents

Total of received citations

Average of citations per UPC document # documents with citations of UPC authors
459 6467 14,09 5701
Note: the table of citations above the line graph collected data from January 2007 until July 2018. The chart does not include citations generated from January 2018.

Interactive map of the 50 most cited UPC authors

  • Each node indicates the number of citations received by the referenced author.
  • Once the map has opened, refer to the instructions for use to make the most of the possibilities it offers.

 

 

Most cited UPC documents

Reorientation and Allied Dynamics in Water and Aqueous Solutions
By: Laage, Damien; Stirnemann, Guillaume; Sterpone, Fabio; et al.
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, VOL 62   Book Series: Annual Review of Physical Chemistry   Volume: 62   Pages: 395-416   Published: 2011
Times Cited: 166
DOI: https://doi.org/10.1146/annurev.physchem.012809.103503
Architecture-Dependent Noise Discriminates Functionally Analogous Differentiation Circuits
By: Cagatay, Tolga; Turcotte, Marc; Elowitz, Michael B.; et al.
CELL   Volume: 139   Issue: 3   Pages: 512-522   Published: OCT 30 2009
Times Cited: 164
DOI: https://doi.org/10.1016/j.cell.2009.07.046
A genome-wide association study identifies CDHR3 as a susceptibility locus for early childhood asthma with severe exacerbations
By: Bonnelykke, Klaus; Sleiman, Patrick; Nielsen, Kasper; et al.
NATURE GENETICS   Volume: 46   Issue: 1   Pages: 51-+   Published: JAN 2014
Times Cited: 163
DOI: https://doi.org/10.1038/ng.2830
Progress in understanding preferential detection of live cells using viability dyes in combination with DNA amplification
By: Fittipaldi, Mariana; Nocker, Andreas; Codony, Francesc
JOURNAL OF MICROBIOLOGICAL METHODS   Volume: 91   Issue: 2   Pages: 276-289   Published: NOV 2012
Times Cited: 134
DOI: https://doi.org/10.1016/j.mimet.2012.08.007
Long non-coding RNAs as a source of new peptides
Times Cited: 129
DOI: https://doi.org/10.7554/eLife.03523.001
Localized cell death focuses mechanical forces during 3D patterning in a biofilm
By: Asally, Munehiro; Kittisopikul, Mark; Rue, Pau; et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA   Volume: 109   Issue: 46   Pages: 18891-18896  Published: NOV 13 2012
Times Cited: 128
DOI: https://doi.org/10.1073/pnas.1212429109
Diffusion-Based Noise Analysis for Molecular Communication in Nanonetworks
By: Pierobon, Massimiliano; Akyildiz, Ian F.
IEEE TRANSACTIONS ON SIGNAL PROCESSING   Volume: 59   Issue: 6   Pages: 2532-2547   Published: JUN 2011
Times Cited: 117
DOI: https://doi.org/10.1109/TSP.2011.2114656
The histone variant macroH2A is an epigenetic regulator of key developmental genes
By: Buschbeck, Marcus; Uribesalgo, Iris; Wibowo, Indra; et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY   Volume: 16   Issue: 10   Pages: 1074-U95   Published: OCT 2009
Times Cited: 109
DOI: https://doi.org/10.1038/nsmb.1665
Specific secondary genetic alterations in mantle cell lymphoma provide prognostic information independent of the gene expression-based proliferation signature
By: Salaverria, Itziar; Zettl, Andreas; Bea, Silvia; et al.
Conference: 95th Annual Meeting of the United-States-and-Canadian-Academy-of-Pathology Location: Atlanta, GA Date: FEB 11-17, 2006
Sponsor(s): US & Canadian Acad Pathol
JOURNAL OF CLINICAL ONCOLOGY   Volume: 25   Issue: 10   Pages: 1216-1222   Published: APR 1 2007
Times Cited: 107
DOI: https://doi.org/10.1200/JCO.2006.08.4251
Molecular Subsets of Mantle Cell Lymphoma Defined by the IGHV Mutational Status and SOX11 Expression Have Distinct Biologic and Clinical Features
By: Navarro, Alba; Clot, Guillem; Royo, Cristina; et al.
CANCER RESEARCH   Volume: 72   Issue: 20   Pages: 5307-5316   Published: OCT 15 2012
Times Cited: 106
DOI: https://doi.org/10.1158/0008-5472.CAN-12-1615
Long-chain fatty acids inhibition and adaptation process in anaerobic thermophilic digestion: Batch tests, microbial community structure and mathematical modelling
By: Palatsi, J.; Illa, J.; Prenafeta-Boldu, F. X.; et al.
BIORESOURCE TECHNOLOGY   Volume: 101   Issue: 7   Pages: 2243-2251   Published: APR 2010
Times Cited: 88
DOI: https://doi.org/10.1016/j.biortech.2009.11.069
Effect of ions on a dipalmitoyl phosphatidylcholine bilayer. A molecular dynamics simulation study
By: Cordomi, Arnau; Edholm, Olle; Perez, Juan J.
JOURNAL OF PHYSICAL CHEMISTRY B   Volume: 112   Issue: 5   Pages: 1397-1408   Published: FEB 7 2008
Times Cited: 86
DOI: https://doi.org/10.1021/jp073897w
Genetic effects on gene expression across human tissues
By: Aguet, Francois; Brown, Andrew A.; Castel, Stephane E.; et al.
Group Author(s): Gtex Consortium; Laboratory Data Analysis; Pathology; et al.
NATURE   Volume: 550   Issue: 7675   Pages: 204-+   Published: OCT 12 2017
Times Cited: 77
DOI: https://doi.org/10.1038/nature24277
Multi-biomarker responses in the freshwater mussel Dreissena polymorpha exposed to polychlorobiphenyls and metals
By: Faria, Melissa; Carrasco, Luis; Diez, Sergi; et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY   Volume: 149   Issue: 3   Pages: 281-288   Published: APR 2009
Times Cited: 77
DOI: https://doi.org/10.1016/j.cbpc.2008.07.012
Noise Analysis in Ligand-Binding Reception for Molecular Communication in Nanonetworks
By: Pierobon, Massimiliano; Akyildiz, Ian F.
IEEE TRANSACTIONS ON SIGNAL PROCESSING   Volume: 59   Issue: 9   Pages: 4168-4182   Published: SEP 2011
Times Cited: 69
DOI: https://doi.org/10.1109/TSP.2011.2159497
A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing
By: Alioto, Tyler S.; Buchhalter, Ivo; Derdak, Sophia; et al.
NATURE COMMUNICATIONS   Volume: 6     Article Number: 10001   Published: DEC 2015
Times Cited: 67
DOI: https://doi.org/10.1038/ncomms10001
Molecular Mechanism of Long-Range Diffusion in Phospholipid Membranes Studied by Quasielastic Neutron Scattering
By: Busch, Sebastian; Smuda, Christoph; Carlos Pardo, Luis; et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY   Volume: 132   Issue: 10   Pages: 3232-3233   Published: MAR 17 2010
Times Cited: 67
DOI: https://doi.org/10.1021/ja907581s
Spatial orientation of collagen fibers in the abdominal aortic aneurysm's wall and its relation to wall mechanics
By: Gasser, T. Christian; Gallinetti, Sara; Xing, Xiao; et al.
ACTA BIOMATERIALIA   Volume: 8   Issue: 8   Pages: 3091-3103   Published: AUG 2012
Times Cited: 62
DOI: https://doi.org/10.1016/j.actbio.2012.04.044
Relaxation dynamics of fluid membranes
By: Arroyo, Marino; DeSimone, Antonio
PHYSICAL REVIEW E   Volume: 79   Issue: 3     Article Number: 031915   Part: 1   Published: MAR 2009
Times Cited: 62
DOI: https://doi.org/10.1103/PhysRevE.79.031915
Simple Forster resonance energy transfer evidence for the ultrahigh quantum dot quenching efficiency by graphene oxide compared to other carbon structures
By: Morales-Narvaez, Eden; Perez-Lopez, Briza; Baptista Pires, Luis; et al.
CARBON   Volume: 50   Issue: 8   Pages: 2987-2993   Published: JUL 2012
Times Cited: 60
DOI: https://doi.org/10.1016/j.carbon.2012.02.081
Experimental and modeling study of the adsorption of single and binary dye solutions with an ion-exchange membrane adsorber
By: Labanda, Jordi; Sabate, Josep; Llorens, Joan
CHEMICAL ENGINEERING JOURNAL   Volume: 166   Issue: 2   Pages: 536-543   Published: JAN 15 2011
Times Cited: 58
DOI: https://doi.org/10.1016/j.cej.2010.11.013
Compression-based classification of biological sequences and structures via the Universal Similarity Metric: experimental assessment
By: Ferragina, Paolo; Giancarlo, Raffaele; Greco, Valentina; et al.
BMC BIOINFORMATICS   Volume: 8     Article Number: 252   Published: JUL 13 2007
Times Cited: 57
DOI: https://doi.org/10.1186/1471-2105-8-252
Contaminant accumulation and multi-biomarker responses in field collected zebra mussels (Dreissena polymorpha) and crayfish (Procambarus clarkii), to evaluate toxicological effects of industrial hazardous dumps in the Ebro river (NE Spain)
By: Faria, Melissa; Huertas, David; Soto, David X.; et al.
CHEMOSPHERE   Volume: 78   Issue: 3   Pages: 232-240   Published: JAN 2010
Times Cited: 55
DOI: https://doi.org/10.1016/j.chemosphere.2009.11.003
An impedimetric immunosensor based on interdigitated microelectrodes (ID mu E) for the determination of atrazine residues in food samples
By: Ramon-Azcon, Javier; Valera, Enrique; Rodriguez, Angel; et al.
BIOSENSORS & BIOELECTRONICS   Volume: 23   Issue: 9   Pages: 1367-1373   Published: APR 2008
Times Cited: 55
DOI: https://doi.org/10.1016/j.bios.2007.12.010
MicroRNA Expression, Chromosomal Alterations, and Immunoglobulin Variable Heavy Chain Hypermutations in Mantle Cell Lymphomas
By: Navarro, Alba; Bea, Silvia; Fernandez, Veronica; et al.
CANCER RESEARCH   Volume: 69   Issue: 17   Pages: 7071-7078   Published: SEP 1 2009
Times Cited: 54
DOI: https://doi.org/10.1158/0008-5472.CAN-09-1095
Note: no UPC authors appearing in a reference means that their names are included in “et al.”. To show the full information, click on the DOI.

 

Interactive map of the WoS subject categories assigned to documents containing citations of UPC authors

  • Each node indicates the number of journal articles and conference papers indexed under the specified subject category. The edges indicate the number of documents related to the linked topics.
  • Once the map has opened, refer to the instructions for use to make the most of the possibilities it offers.

 

The Rector Gabriel Ferraté Library is grateful for the collaboration of professors René Alquézar and Elisa Sayrol in the preparation of the recerTIC UPC reports.

Logotips


Darrera actualització: 06/03/2019